Source code for pypulseq.opts

from typing import Union

from pypulseq.convert import convert


class Opts:
    """
    System limits of an MR scanner.

    Note: Default values can be overwritten by creating an Opts object and
    calling `set_as_default`.

    Attributes
    ----------
    adc_dead_time : float, default=0
        Dead time for ADC readout pulses.
    adc_raster_time : float, default=100e-9
        Raster time for ADC readout pulses.
    block_duration_raster : float, default=10e-6
        Raster time for block durations.
    gamma : float, default=42.576e6
        Gyromagnetic ratio. Default gamma is specified for Hydrogen.
    grad_raster_time : float, default=10e-6
        Raster time for gradient waveforms.
    grad_unit : str, default='Hz/m'
        Unit of maximum gradient amplitude. Must be one of 'Hz/m', 'mT/m' or 'rad/ms/mm'.
    max_grad : float, default=40 mT/m
        Maximum gradient amplitude.
    max_slew : float, default=170 T/m/s
        Maximum slew rate.
    rf_dead_time : float, default=0
        Dead time for radio-frequency pulses.
    rf_raster_time : float, default=1e-6
        Raster time for radio-frequency pulses.
    rf_ringdown_time : float, default=0
        Ringdown time for radio-frequency pulses.
    adc_samples_limit : int, default=0
        Maximum number of samples for a single ADC object. If 0, no limit is set.
    adc_samples_divisor : int, default=4
        Samples of ADC must be divisible by 'adc_samples_divisor'.
    rise_time : float, default=0
        Rise time for gradients.
    slew_unit : str, default='Hz/m/s'
        Unit of maximum slew rate. Must be one of 'Hz/m/s', 'mT/m/ms', 'T/m/s' or 'rad/ms/mm/ms'.
    B0 : float, default=1.5
        Main magnetic field strength (in tesla)

    Raises
    ------
    ValueError
        If invalid `grad_unit` is passed. Must be one of 'Hz/m', 'mT/m' or 'rad/ms/mm'.
        If invalid `slew_unit` is passed. Must be one of 'Hz/m/s', 'mT/m/ms', 'T/m/s' or 'rad/ms/mm/ms'.
    """

    def __init__(
        self,
        adc_dead_time: Union[float, None] = None,
        adc_raster_time: Union[float, None] = None,
        block_duration_raster: Union[float, None] = None,
        gamma: Union[float, None] = None,
        grad_raster_time: Union[float, None] = None,
        grad_unit: str = 'Hz/m',
        max_grad: Union[float, None] = None,
        max_slew: Union[float, None] = None,
        rf_dead_time: Union[float, None] = None,
        rf_raster_time: Union[float, None] = None,
        rf_ringdown_time: Union[float, None] = None,
        adc_samples_limit: Union[int, None] = None,
        adc_samples_divisor: Union[int, None] = None,
        rise_time: Union[float, None] = None,
        slew_unit: str = 'Hz/m/s',
        B0: Union[float, None] = None,
    ):
        valid_grad_units = ['Hz/m', 'mT/m', 'rad/ms/mm']
        valid_slew_units = ['Hz/m/s', 'mT/m/ms', 'T/m/s', 'rad/ms/mm/ms']

        if grad_unit not in valid_grad_units:
            raise ValueError(
                f"Invalid gradient unit. Must be one of 'Hz/m', 'mT/m' or 'rad/ms/mm'. Passed: {grad_unit}"
            )

        if slew_unit not in valid_slew_units:
            raise ValueError(
                f"Invalid slew rate unit. Must be one of 'Hz/m/s', 'mT/m/ms', 'T/m/s' or 'rad/ms/mm/ms'. "
                f'Passed: {slew_unit}'
            )

        if gamma is None:
            gamma = Opts.default.gamma

        if max_grad is not None:
            max_grad = convert(from_value=max_grad, from_unit=grad_unit, to_unit='Hz/m', gamma=abs(gamma))
        else:
            max_grad = Opts.default.max_grad

        if max_slew is not None:
            max_slew = convert(from_value=max_slew, from_unit=slew_unit, to_unit='Hz/m', gamma=abs(gamma))
        else:
            max_slew = Opts.default.max_slew

        if rise_time is not None:
            max_slew = max_grad / rise_time

        if adc_dead_time is None:
            adc_dead_time = Opts.default.adc_dead_time
        if adc_raster_time is None:
            adc_raster_time = Opts.default.adc_raster_time
        if block_duration_raster is None:
            block_duration_raster = Opts.default.block_duration_raster

        if rf_dead_time is None:
            rf_dead_time = Opts.default.rf_dead_time
        if rf_raster_time is None:
            rf_raster_time = Opts.default.rf_raster_time
        if grad_raster_time is None:
            grad_raster_time = Opts.default.grad_raster_time
        if rf_ringdown_time is None:
            rf_ringdown_time = Opts.default.rf_ringdown_time
        if adc_samples_limit is None:
            adc_samples_limit = Opts.default.adc_samples_limit
        if adc_samples_divisor is None:
            adc_samples_divisor = Opts.default.adc_samples_divisor
        if B0 is None:
            B0 = Opts.default.B0

        self.max_grad = max_grad
        self.max_slew = max_slew
        self.rise_time = rise_time
        self.rf_dead_time = rf_dead_time
        self.rf_ringdown_time = rf_ringdown_time
        self.adc_dead_time = adc_dead_time
        self.adc_raster_time = adc_raster_time
        self.rf_raster_time = rf_raster_time
        self.grad_raster_time = grad_raster_time
        self.block_duration_raster = block_duration_raster
        self.adc_samples_limit = adc_samples_limit
        self.adc_samples_divisor = adc_samples_divisor
        self.gamma = gamma
        self.B0 = B0

[docs] def set_as_default(self): Opts.default = self
@classmethod def reset_default(cls): cls.default = Opts( max_grad=convert(from_value=40, from_unit='mT/m'), max_slew=convert(from_value=170, from_unit='T/m/s'), rf_dead_time=0, rf_ringdown_time=0, adc_dead_time=0, adc_raster_time=100e-9, rf_raster_time=1e-6, grad_raster_time=10e-6, block_duration_raster=10e-6, adc_samples_limit=0, adc_samples_divisor=4, gamma=42576000, B0=1.5, ) def __str__(self) -> str: """ Print a string representation of the system limits objects. """ variables = vars(self) s = [f'{key}: {value}' for key, value in variables.items()] s = '\n'.join(s) s = 'System limits:\n' + s return s Opts.reset_default()